Preview

Vegetable crops of Russia

Advanced search

Genetic resources of some representatives of the genus Allium L.

https://doi.org/10.18619/2072-9146-2025-3-30-37

Abstract

Since ancient times, species of the genus Allium have played a significant role in the human diet, in traditional medicine for the treatment of many diseases and in official medicine as raw materials, as well as medicinal and prophylactic agents. Phytochemicals such as organosulfur compounds, phenolic compounds, fatty acids and saponins are associated with the antioxidant and antimicrobial properties of these species, among many other biologically active substances. All parts of the plant, including the bulb, leaf, pseudostem, root, flower and seed, exhibit antioxidant properties in in vitro assays. Characteristic phytocompounds that contribute to the antimicrobial activity of onion crops include allicin, ajoene, allyl alcohol and some diallyl sulfides. Nanoparticles synthesized using Allium species are also known for their notable antimicrobial properties. Allium species are a product with high nutritional value, and due to secondary metabolites, it is also used to protect plants with various products created on the basis of its biologically active components. Allium species are valued for their unique macroelement composition and are used as popular vegetables and spices. In the Russian Federation, there is significant biological and morphological diversity of cultivated and wild onion species. Over the past few years, an extensive program of collecting and studying Allium species has been carried out at VNIIO – a branch of the FSBSI Federal Scientific Vegetable Center. High morphological and biochemical variability of the studied species has been established, which can be used in breeding programs and when growing varieties.

About the Authors

M. I. Ivanova
All-Russian Research Institute of Vegetable Growing – branch of the Federal State Budgetary Scientific Institution "Federal Scientific Vegetable Center"
Russian Federation

Maria I. Ivanova – Dr. Sci. (Agriculture), Professor of the Russian Academy of Sciences, Chief Researcher

p. 500, Vereya village, Ramensky district, Moscow region, 140153



A. V. Polyakov
All-Russian Research Institute of Vegetable Growing – branch of the Federal State Budgetary Scientific Institution "Federal Scientific Vegetable Center"
Russian Federation

Alexey V. Polyakov – Dr. Sci. (Biology), Professor, Chief Researcher

p. 500, Vereya village, Ramensky district, Moscow region, 140153



A. I. Kashleva
All-Russian Research Institute of Vegetable Growing – branch of the Federal State Budgetary Scientific Institution "Federal Scientific Vegetable Center"
Russian Federation

Anna I. Kashleva – Cand. Sci. (Agriculture), Senior Researcher

p. 500, Vereya village, Ramensky district, Moscow region, 140153



References

1. Block E. Allium botany and cultivation, ancient and modern. In Garlic and Other Alliums: The Lore and The Science; RSC Publishing Cambridge: Cambridge London, UK, 2010; pp. 1–32.

2. Teshika J.D., Zakariyyah A.M., Zaynab T., Zengin G., Rengasamy K.R.R., Pandian S.K., Fawzi M.M. Traditional and modern uses of onion bulb (Allium cepa L.): A systematic review. Crit. Rev. Food Sci. Nutr. 2019;59:S39–S70. https://doi.org/10.1080/10408398.2018.1499074.

3. Chase M.W., Christenhusz, M.J.M., Fay M.F., Byng J.W., Judd W.S., Soltis D.E. An update of the angiosperm phylogeny group classification for the orders and families of flowering plants: APG IV. Bot. J. Linnaean Soc. 2016;181:1–20. https://doi.org/10.1111/boj.12385.

4. Govaerts R., Kington S., Friesen N., Fritsch R., Snijman D. A., Marcucci R. World checklist of Amaryllidaceae. Facilitated by the Royal Botanic Gardens, Kew. 2021. Available at: http://apps.kew.org/wcsp/

5. Pandey A., Rai K., Malav P., Subramani R. Allium negianum (Amaryllidaceae): A new species under subg. Rhizirideum from Uttarakhand Himalaya, India. PhytoKeys. 2021;183:77–93. https://doi.org/10.3897/phytokeys.183.65433

6. Friesen N. Chapter 1. Genus Allium: Evolution, classification, and domestication / in Rabinowitch, H.D., Brian, t. (Eds.) Edible Alliums: Modern biology, production and uses (Wallingford, UK: CABI Org.). 2022.

7. Fritsch R.M., Friesen N. Evolution, domestication and taxonomy. In Allium Crop Science: Recent Advances; Rabinowitch, H.D., Currah, L., Eds.; CABI Publishing: Wallingfod, UK, 2002; pp. 5–27.

8. Li Q.Q., Zhou S.D., He X.-J., Yu Y., Zhang Y.C., Wei X.Q. Phylogeny and biogeography of Allium (Amaryllidaceae: Allieae) based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species endemic to China. Ann. Bot. 2010;106(5):709–733. https://doi.org/10.1093/aob/mcq177

9. Wheeler E.J., Mashayekhi S., McNeal D.W., Columbus J.T., Pires J.C. Molecular systematics of Allium subgenus Amerallium (Amaryllidaceae) in north America. Am. J. Bot. 2013;100:701–711. https://doi.org/10.3732/ajb.1200641

10. Gemejiyeva N., Tokenova A., Friesen N. Review of the current state and prospects of studying Kazakh species of the genus Allium L. Проблемы ботаники Южной Сибири и Монголии. 2021;20:97-101. https://doi.org/10.14258/pbssm.2021020.

11. Friesen N., Fritsch R.M., Blattner F.R. Phylogeny and new infrageneric classification of Allium L. (Alliaceae) based on nuclear ribosomal DNA ITS sequences. Aliso. 2006;22(1):372–395. https://doi.org/10.3732/ajb.1200641

12. Hauenschild F., Favre A., Schnitzler J., Michalak I., Freiberg M., MuellnerRiehl A.N. Spatio-temporal evolution of Allium L. in the Qinghai–Tibet–Plateau region: Immigration and in situ radiation. Plant Divers. 2017;39:167–179. https://doi.org/10.1016/j.pld.2017.05.010

13. Xie D.F., Yu H.X., Price M., Xie C., Deng Y.Q., Chen J.P. et al. Phylogeny of Chinese Allium species in section Daghestanica and adaptive evolution of Allium (Amaryllidaceae, Allioideae) species revealed by the chloroplast complete genome. Front. Plant Sci. 2019;10:e460. https://doi.org/10.3389/fpls.2019.00460

14. Xie D.F., Tan J.B., Yu Y., Gui L.J., Su D.M., Zhou S.D. Insights into phylogeny, age and evolution of Allium (Amaryllidaceae) based on the whole plastome sequences. Ann. Bot. 2020;125:1039–1055. https://doi.org/10.1093/aob/mcaa024

15. Costa L., Jimenez H., Carvalho R., Carvalho-Sobrinho J., Escobar I., Souza G. Divide to conquer: Evolutionary history of Allioideae tribes (Amaryllidaceae) is linked to distinct trends of karyotype evolution. Front. Plant Sci. 2020;11:320. https://doi.org/10.3389/fpls.2020.00320

16. Friesen N., Smirnov S., Herden T., Oyuntsetseg B., Shmakov A., Hurka H. Allium species of section Rhizomatosa, early members of the Central Asian steppe vegetation. Flora 2020;263:151536. https://doi.org/10.1016/j.flora.2019.151536

17. Fritsch R.M., Abbasi M. A taxonomic review of Allium subg. Melanocrommyum in Iran. Halberstädter Druckhaus Gmb H. Gatersleben. Germany, 2013. 240 p.

18. FAOSTAT - Food and Agriculture Organization Corporate Statistical Database (2021). Available from: http://www.fao.org/faostat/en/#data/QC/visualize

19. Fredotović Ž., Puizina J. Edible Allium species: Chemical composition, biological activity and health effects. Ital. J. Food Sci. 2019;31:19–39.

20. Vuković S., Moravčević D., Gvozdanović-Varga J., Dojčinović, B., Vujošević A., Pećinar I., Kilibarda S., Kostić A.Ž. Elemental profile, general phytochemical composition and bioaccumulation abilities of selected Allium species biofortified with selenium under open field conditions. Plants. 2023;12:349. https://doi.org/10.3390/plants12020349

21. Benkeblia N. Antimicrobial activity of essential oil extracts of various onions (Allium cepa) and garlic (Allium sativum). Food Sci. Technol. 2004;37:263–268. https://doi.org/10.1016/j.lwt.2003.09.001

22. Charles D.J. Antioxidant Properties of Spices, Herbs and Other Sources; Springer: New York, NY, USA, 2013; pp. 225–230.

23. Kucekova Z., Mlcek J., Humpolicek P., Rop O., Valasek P., Saha P. Phenolic compounds from Allium schoenoprasum, Tragopogon pratensis and Rumex acetosa and their antiproliferative effects. Molecules. 2011;16:9207–9217. https://doi.org/10.3390/molecules16119207

24. Parvu A.E., Parvu M., Vlase L., Miclea P., Mot A.C., Silaghi-Dumitrescu R. Anti-inflammatory effects of Allium schoenoprasum L. leaves. J. Physiol. Pharmacol. 2014;65:309–315.

25. Denaro M., Smeriglio A., Barreca D., De Francesco C., Occhiuto C., Milano G., Trombetta D. Antiviral Activity of Plants and Their Isolated Bioactive Compounds: An update. Phytother. Res. 2020;34:742–768. https://doi.org/10.1002/ptr.6575

26. Rocchetti G., Zhang L., Bocchi S., Giuberti G., Ak G., Elbasan F., Yıldıztugay E., Ceylan R., Picot-Allain M.C.N., Mahomoodally M.F., Lucini L., Zengin G. The functional potential of nine Allium species related to their untargeted phytochemical characterization, antioxidant capacity and enzyme inhibitory ability. Food Chem. 2022;368:130782. https://doi.org/10.1016/j.foodchem.2021.130782

27. Panis B., Nagel M., Van den Houwe I. Challenges and prospects for the conservation of crop genetic resources in field genebanks, in vitro collections and/or in liquid nitrogen. Plants. 2020;9(12): 1634. https://doi.org/10.3390/plants9121634

28. Hawkes J.G., Maxted N., Ford-Lloyd B.V. Evolution of plants under domestication. The ex situ conservation of plant genetic resources. First edition: 2000:19- 31. Availabe from: https://www.springer.com/gp/book/9780792364429

29. Bhusal R., Islam S., Khar A., Singh S., Jain N., Tomar B. S. Diversity analysis and trait association study for antioxidants and quality traits in https://doi.org/10.1007/s10722-019-00811-8

30. Barboza K., Salinas M. C., Acuña C. V., Bannoud F., Beretta V., GarcíaLampasona S., Burba J. L., Galmarini C. R., Cavagnaro P. F. Assessment of genetic diversity and population structure in a garlic (Allium sativum L.) germplasm collection varying in bulb content of pyruvate, phenolics, and solids. Scientia Horticulturae. 2020;261:108900. https://doi.org/10.1016/j.scienta.2019.108900

31. Hirata S., Abdelrahman M., Yamauchi N., Shigyo M. Characteristics of chemical components in genetic resources of garlic Allium sativum collected from all over the world. Genetic Resources and Crop Evolution. 2015;63(1):35–45. https://doi.org/10.1007/s10722-015-0233-7

32. Kamenetsky R. Garlic: Botany and Horticulture. In Horticultural Reviews, Jules J. (ed.), 2007. 123–172.

33. Shaaf S., Sharma R., Kilian B., Walther A., Özkan, H., Karami E., Mohammadi B. Genetic structure and eco-geographical adaptation of garlic landraces (Allium sativum L.) in Iran. Genetic Resources and Crop Evolution. 2014;61(8):1565–1580. https://doi.org/10.1007/s10722-014-0131-4

34. Jump A.S., Marchant R., Peñuelas J. Environmental change and the option value of genetic diversity. Trends in Plant Science. 2009;14(1):51–58. https://doi.org/10.1016/j.tplants.2008.10.002

35. Siracusa L., Avola G., Patanè C., Riggi E., Ruberto G. Re-evaluation of traditional Mediterranean foods. The local landraces of “Cipolla di Giarratana” (Allium cepa L.) and long-storage tomato (Lycopersicon esculentum L.): quality traits and polyphenol content. Journal of the Science of Food and Agriculture. 2013;93(14):3512–3519. https://doi.org/10.1002/jsfa.6199

36. Ferioli F., D’Antuono L.F. Evaluation of phenolics and cysteine sulfoxides in local onion and shallot germplasm from Italy and Ukraine. Genetic Resources and Crop Evolution. 2016;63(4): 601–614. https://doi.org/10.1007/s10722-015-0270-2

37. Fowler C., Hodgkin T. Plant genetic resources for food and agriculture: Assessing global availability. Annual Review of Environment and Resources. 2004;29(1):143–179. https://doi.org/10.1146/annurev.energy.29.062403.102203

38. Govindaraj M., Vetriventhan M., Srinivasan M. Importance of genetic diversity assessment in crop plants and its recent advances: An overview of its analytical perspectives. Genetics Research International. 2015:431487. https://doi.org/10.1155/2015/431487

39. Khlestkina E.K. Genetic resources in Russia: from collections to bioresource centers. Proceedings on applied botany, genetics and breeding. 2022;183(1):9- 30. (In Russ.) https://doi.org/10.30901/2227-8834-2022-1-9-30

40. Artemyeva A.M. VIR worldwide collection of vegetable and cucurbit crops: formation, status and modern research activities. Acta Horticulturae. 2024;1391:283-290. https://doi.org/10.17660/ActaHortic.2024.1391.39

41. Tukhvatullina L.A., Abramova L.M. The collection of Allium L. at the South-Ural Botanical Garden–Institute. Proceedings on applied botany, genetics and breeding. 2022;183(4):192-207. (In Russ.) https://doi.org/10.30901/2227-8834-2022-4-192-207

42. Seredin T.M., Shumilina V.V., Ivanova M.I., Romanov V.S., Agafonov A.F. Breeding work with species of the genus Allium L. in the conditions of the NonChernozem zone of Russia: new varieties. Industrial Botany. 2022;22(2):34–39. (In Russ.) https://doi.org/10.5281/zenodo.7394466 https://elibrary.ru/duzkwt

43. Polyakov A.V., Alekseeva T.V. Ability of garlic (Allium sativum L.) to accumulate germanium under natural and experimental conditions. Khimija rastitel'nogo syr'ja. 2023;(1):279–286. (In Russ.) https://doi.org/10.14258/jcprm.20230110958 https://elibrary.ru/ftmdki

44. Espinosa-Leal, C.A.; Puente-Garza, C.A.; García-Lara, S. In vitro plant tissue culture: Means for production of biological active compounds. Planta. 2018;(248):1–18. https://doi.org/10.1007/s00425-018-2910-1

45. Polyakov A.V., Chikrizova O.F., Lebedeva N.N. Long-term storage of Phlox paniculata L. transplants in vitro. Actual problems of innovations with unconventional natural resources and creation of functional products. IV Russian scientific and practical conf. M.: RANS, 2007. P. 79. (In Russ.)

46. Havey M.J. Onion breeding. Plant Breed. Rev. 2018;(42):39–85. https://doi.org/10.1002/9781119521358.ch2

47. Chuda A., Klosowska K., Adamus A. Morphological, cytological and embryological characterization of F1 A.cepa× A.roylei hybrids. Acta Biol.Crac. Ser. Bot. 2015;(57):98–105. https://doi.org/10.1515/abcsb-2015-0025

48. Villano C., Esposito S., Carucci F., Iorizzo M., Frusciante L., Carputo D., Aversano R. High-throughput genotyping in onion reveals structure of genetic diversity and informative SNPs useful for molecular breeding. Mol. Breed. 2019;(39):5. https://doi.org/10.1007/s11032-018-0912-0

49. van Raamsdonk L.W.D., Ensink W., van Heusden A.W., Vrielink-van Ginkel M., Kik C. Biodiversity assessment based on cpDNA and crossability analysis in selected species of Allium subgenus Rhizirideum. Theor. Appl. Genet. 2003;(107):1048–1058. https://doi.org/10.1007/s00122-003-1335-8

50. Araki N., Masuzaki S.-I., Tsukazaki H., Yaguchi S., Wako T., Tashiro Y., Yamauchi N., Shigyo M. Development of microsatellite markers in cultivated and wild species of sections Cepa and Phyllodolon in Allium. Euphytica. 2009;173:321–328. https://doi.org/10.1007/s10681-009-0087-1

51. Budylin M., Kan L.Y., Romanov V., Khrustaleva L. GISH study of advanced generation of the interspecific hybrids between Allium cepa L. and Allium fistulosum L. with relative resistance to downy mildew. Russ. J. Genet. 2014;50:387–394. https://doi.org/10.1134/S1022795414040036

52. Pandey A., Malav P.K., Semwal D., Chander S., Gowthami R., Rai K. Repository of Allium Genetic Resources at ICAR-NBPGR: Prospects and Challenges for Collection and Conservation. Indian J. Plant Genet. Resour. 2022;35:185–190. https://doi.org/10.5958/0976-1926.2022.00066.3

53. Scholten O.E., van Kaauwen M.P., Shahin A., Hendrickx P.M., Keizer L., Burger K., van Heusden A.W., van der Linden C.G., Vosman B. SNP-markers in Allium species to facilitate introgression breeding in onion. BMC Plant Biol. 2016;16:187. https://doi.org/10.1186/s12870-016-0879-0

54. Engels J.M.M., Thormann I. Main Challenges and Actions Needed to Improve Conservation and Sustainable Use of Our Crop Wild Relatives. Plants. 2020;9:968. https://doi.org/10.3390/plants9080968

55. Semwal D.P., Pandey A., Ahlawat S.P. Genetic resources of genus Allium in India: Collection status, distribution and diversity mapping using GIS tools. Indian J. Plant Genet. Resour. 2021;34:206–215. https://doi.org/10.5958/0976-1926.2021.00019.X

56. Keller E.R.J., Zanke C.D., Blattner F.R., Kik C., Stavělíková H., Zámečník J., Esnault F., Kotlińska T., Solberg S., Miccolis V. EURALLIVEG: Establishment of a European core collection by cryopreservation and virus elimination in garlic. Acta Hortic. 2012;969:319–327. https://doi.org/10.17660/ActaHortic.2012.969.41

57. Anđelković V., Cvejić S., Jocić S., Kondić-Špika A., Marjanović Jeromela A., Mikić S., Prodanović S., Radanović A., Savić Ivanov M., Trkulja D. Use of plant genetic resources in crop improvement—Example of Serbia. Genet. Resour. Crop Evol. 2020;67:1935–1948. https://doi.org/10.1007/s10722-020-01029-9

58. Lyngkhoi F., Saini N., Gaikwad A.B., Thirunavukkarasu N., Verma P., Silvar C., Yadav S., Khar A. Genetic diversity and population structure in onion (Allium cepa L.) accessions based on morphological and molecular approaches. Physiol. Mol. Biol. Plants. 2021;27:2517–2532. https://doi.org/10.1007/s12298-021-01101-3

59. Galluzzi G., Halewood M., Noriega I.L., Vernooy R. Twenty-five years of international exchanges of plant genetic resources facilitated by the CGIAR genebanks: A case study on global interdependence. Biodivers. Conserv. 2016;25:1421–1446. https://doi.org/10.1007/s10531-016-1109-7

60. Ivanova M.I., Bukharov A.F., Baleev D.N., Bukharova A.R., Kashleva A.I., Seredin T.M., Razin O.A. Biochemical composition of leaves of Allium L. species in the conditions of the Moscow region. Achievements of science and technology in agro-industrial complex. 2019;33(5):47-50. (In Russ.) https://doi.org/10.24411/0235-2451-2019-10511 https://elibrary.ru/zndocx

61. Kornev A.V., Ivanova M.I., Kashleva A.I. Biochemical composition of edible flowers of Allium L. in the conditions of the Moscow region. Rice growing. 2024;23- 3(64):24-28. (In Russ.) https://doi.org/10.33775/1684-2464-2024-64-3-24-28 https://elibrary.ru/qjccjp


Review

For citations:


Ivanova M.I., Polyakov A.V., Kashleva A.I. Genetic resources of some representatives of the genus Allium L. Vegetable crops of Russia. 2025;(3):30-37. (In Russ.) https://doi.org/10.18619/2072-9146-2025-3-30-37

Views: 95


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2072-9146 (Print)
ISSN 2618-7132 (Online)